SpaRED
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API
Datasets
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Gene Features
Spot Features
Layer Operations
Denoising
spared.denoising.median_cleaner
spared.denoising.spackle_cleaner
spackle_cleaner()
Graph Operations
Plotting
Dataloaders
Models
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SpaRED
API
spared.denoising.spackle_cleaner
Edit on GitHub
spared.denoising.spackle_cleaner
spared.denoising.
spackle_cleaner
(
adata
:
AnnData
,
dataset
:
str
,
from_layer
:
str
,
to_layer
:
str
,
device
,
lr
=
0.001
,
train
=
True
,
get_performance_metrics
=
True
,
load_ckpt_path
=
''
,
optimizer
=
'Adam'
,
max_steps
=
1000
)
→
AnnData
[source]