spared.plotting.plot_data_distribution_stats

spared.plotting.plot_data_distribution_stats(dataset: str, processed_adata: AnnData, path: str) None[source]

Plot dataset’s general stats

This function plots a pie chart and bar plots of the distribution of spots and slides in the dataset split.

Parameters:
  • dataset – Name of the dataset

  • processed_adata (ad.AnnData) – Processed and filtered data ready to use by the model.

  • path (str) – Path to save the image.